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A set of shell functions for use in CI/CD pipelines.

A set of docker images that can be useful for the development and testing of WDL pipelines.

Spack configuration to build software and module for use on Dori cluster

IMG annotation pipeline. It is the central repo for NMDC, IMG and the Advanced Analysis group. The following WDL was derived (and maintained by) Marcel Huntemann's pipeline.

contains a readme describing how to add your project to this group.

An attempt to create a series of wrapper scripts that will submit to jaws, continually check to see if the run has succeeded, and then gatherFiles afterwards.