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metagenome/metatranscriptome assembly and reporting code

Code supporting genome assembly and analysis of small Eukaryotes, fungi, algae, organelles.

CLI for JAWS users

Documentation for RolyPoly

De-novo transcriptome assembly from RNA-seq data using Trinity

Synbio team miseq short read validation.

The synbioqc-pbj pipeline altered for running the qc pipeline on reference sequences that have been barcoded prior to the PacBio barcoding and adapter additions, so these must be demultiplexed prior to the qc analysis.