Merge requests · User Support Analysis / rna-assembly

Merge trains

update jaws client image

!106 · created Nov 07, 2023 by Matthew James Blow
- Merged
updated Nov 07, 2023
add the team tag with value gt-ga to lib/submit.py for compatibility with latest jaws version

!105 · created Nov 06, 2023 by Matthew Mingay
- Merged
updated Nov 06, 2023
refactor: match minor updates in usapipeline

!102 · created Oct 12, 2023 by Will Holtz
- Merged
updated Oct 13, 2023
fix project name in DEVELOPMENT.md

!104 · created Oct 12, 2023 by Will Holtz
- Merged
updated Oct 12, 2023
docs: add deployment documentaion

!103 · created Oct 12, 2023 by Will Holtz
- Merged
updated Oct 12, 2023
Finalize

!101 · created Sep 27, 2023 by Will Holtz
- Merged
updated Sep 27, 2023
pass RQCstats the -useGenome flag

!100 · created Sep 27, 2023 by Will Holtz
- Merged
updated Sep 27, 2023
fix: acc.log stats back in asm_notes

!99 · created Sep 27, 2023 by Will Holtz
- Merged
updated Sep 27, 2023
fix: retrieve can get extra_args

!98 · created Sep 26, 2023 by Will Holtz
- Merged
updated Sep 26, 2023
fix: asm_notes restored to full contents

!97 · created Sep 25, 2023 by Will Holtz
- Merged
updated Sep 25, 2023
Use usapipeline

!96 · created Sep 08, 2023 by Will Holtz
- Merged
updated Sep 08, 2023
fix: trans_asm works without accuracy log

!95 · created Aug 16, 2023 by Will Holtz
- Merged
updated Aug 16, 2023
fix: use perlmutter as jamo source

!94 · created Aug 12, 2023 by Will Holtz
- Merged
updated Aug 12, 2023
move to svc-ga account for deployment on dori10

!92 · created Aug 04, 2023 by Will Holtz
- Merged
updated Aug 04, 2023
fix: remove extra shifts from finalize

!91 · created Jul 27, 2023 by Will Holtz
- Merged
updated Jul 27, 2023
feat: add done files to finalize

!90 · created Jul 18, 2023 by Will Holtz
- Merged
updated Jul 18, 2023
fix: repo_path mis-name in finalize

!89 · created Jul 18, 2023 by Will Holtz
- Merged
updated Jul 18, 2023
feat: setup defaults to only filtered reads

!88 · created Jul 17, 2023 by Will Holtz
- Merged
updated Jul 17, 2023
ci: add shellcheck to nox

!87 · created Jul 14, 2023 by Will Holtz
- Merged
updated Jul 14, 2023
ci: configure python code testing

!86 · created Jul 14, 2023 by Will Holtz
- Merged
updated Jul 14, 2023